theme_volcano_custom: volcano theme complex

In lagelab/Genoppi: genoppi

volcano theme complex

Description

Sets up custom bolcano plot theme.

Usage

theme_volcano_custom(
  p,
  tick_sz_x = -0.15,
  tick_sz_y = NULL,
  normalize_tick_sz = T,
  axes_width = 0.5,
  ticks_width = 0.7,
  ticks_labs_cex = 4,
  ticks_labs_x_vjust = 2,
  ticks_labs_y_hjust = 2,
  lab_cex = 2,
  xlab_vjust = 0.6,
  xlab_hjust = 0.38,
  ylab_vjust = 1.5,
  ylab_hjust = 0,
  font_family = "Helvetica",
  grid_lines = F,
  xlab = NULL,
  ylab = NULL
)

Arguments

p	the ggplot to be converted
tick_sz_x	Tick-size.
tick_sz_y	tick size.
normalize_tick_sz	Boolean. If TRUE, the tick_sz_y will be normalized according to argument tick_sz_x.
axes_width	the width of the x and y-axis.
ticks_width	the width of the ticks.
ticks_labs_cex	the character expansion factor of tick labels.
ticks_labs_x_vjust	Vertical adjustment of tick labels on x axis.
ticks_labs_y_hjust	Horizontal adjustment of tick labels on y axis.
lab_cex	numeric. Character expansion factor for labels.
xlab_vjust	Vertical adjustment on label on x-axis.
xlab_hjust	Horizontal adjustment on label on x-axis.
ylab_vjust	Vertical adjustment on label on y-axis.
ylab_hjust	Horizontal adjustment on label on y-axis.
font_family	string for the font family.
grid_lines	Boolean. Draw grid lines?
xlab	String. alternative x label.
ylab	String. alternative y label.

See Also

Other ggplot: plot_tissue_enrichment(), theme_genoppi_bar(), theme_scatter(), theme_volcano()

lagelab/Genoppi documentation built on Oct. 13, 2022, 2:36 p.m.