dimsum__add_dropout_pseudocount: dimsum__add_dropout_pseudocount

In lehner-lab/DiMSum: A pipeline for processing deep mutational scanning data

dimsum__add_dropout_pseudocount

Description

Add pseudocount to output samples with dropout (zero read counts).

Usage

dimsum__add_dropout_pseudocount(dimsum_meta, input_dt, all_reps, verbose = T)

Arguments

dimsum_meta	an experiment metadata object (required)
input_dt	input data.table (required)
all_reps	list of replicates to retain (required)
verbose	whether or not to print status messages (default: TRUE)

Value

data.table with pseudocounts added to output samples with dropout

lehner-lab/DiMSum documentation built on April 5, 2025, 10:06 p.m.