dimsum__merge_fitness: dimsum__merge_fitness

Description Usage Arguments Value

View source: R/dimsum__merge_fitness.R

Description

Calculate fitness and count-based error.

Usage

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dimsum__merge_fitness(
  dimsum_meta,
  input_dt,
  doubles_dt,
  singles_dt,
  all_reps,
  fitness_outpath,
  report = TRUE,
  report_outpath = NULL
)

Arguments

dimsum_meta

an experiment metadata object (required)

input_dt

input data.table (required)

doubles_dt

doubles data.table (required)

singles_dt

singles data.table (required)

all_reps

list of replicates to retain (required)

fitness_outpath

output path for saved objects (required)

report

whether or not to generate fitness summary plots (default: TRUE)

report_outpath

fitness report output path

Value

Nothing


lehner-lab/DiMSum documentation built on Sept. 15, 2021, 12:43 a.m.