dimsum__error_model: dimsum__error_model

In lehner-lab/DiMSum: A pipeline for processing deep mutational scanning data

dimsum__error_model

Description

Error model analysis including determination of count-based, replicate and over-sequencing error terms.

Usage

dimsum__error_model(
  dimsum_meta,
  input_dt,
  all_reps,
  report = TRUE,
  report_outpath = NULL
)

Arguments

dimsum_meta	an experiment metadata object (required)
input_dt	input data.table (required)
all_reps	list of replicates to retain (required)
report	whether or not to generate fitness summary plots (default: TRUE)
report_outpath	fitness report output path

Value

error model data.table

lehner-lab/DiMSum documentation built on April 10, 2024, 4:15 a.m.