dimsum__get_cutadapt_options: dimsum__get_cutadapt_options
In lehner-lab/DiMSum: A pipeline for processing deep mutational scanning data
View source: R/dimsum__get_cutadapt_options.R
dimsum__get_cutadapt_options R Documentation
dimsum__get_cutadapt_options
Description
Get command-line options for cutadapt.
Usage
dimsum__get_cutadapt_options(
dimsum_meta,
exp_design_row,
option_type = "default"
)
Arguments
dimsum_meta
an experiment metadata object (required)
exp_design_row
row number of exp_design table (required)
option_type
one of default/cut/swap (default:"default")
Value
A string of command-line options for cutadapt
lehner-lab/DiMSum documentation built on April 10, 2024, 4:15 a.m.
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View source: R/dimsum__get_cutadapt_options.R
| dimsum__get_cutadapt_options | R Documentation |
dimsum__get_cutadapt_options
Description
Get command-line options for cutadapt.
Usage
dimsum__get_cutadapt_options(
dimsum_meta,
exp_design_row,
option_type = "default"
)
Arguments
dimsum_meta |
an experiment metadata object (required) |
exp_design_row |
row number of exp_design table (required) |
option_type |
one of default/cut/swap (default:"default") |
Value
A string of command-line options for cutadapt
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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