dimsum__get_cutadapt_options: dimsum__get_cutadapt_options

Description Usage Arguments Value

View source: R/dimsum__get_cutadapt_options.R

Description

Get command-line options for cutadapt.

Usage

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dimsum__get_cutadapt_options(
  dimsum_meta,
  exp_design_row,
  option_type = "default"
)

Arguments

dimsum_meta

an experiment metadata object (required)

exp_design_row

row number of exp_design table (required)

option_type

one of default/cut/swap (default:"default")

Value

A string of command-line options for cutadapt


lehner-lab/DiMSum documentation built on Sept. 15, 2021, 12:43 a.m.