dimsum__ggpairs_binhex: dimsum__ggpairs_binhex

In lehner-lab/DiMSum: A pipeline for processing deep mutational scanning data

dimsum__ggpairs_binhex

Description

GGpairs plot for all variables in input data table with correlation in upper triangle and 2d binned hexagons in lower triangle.

Usage

dimsum__ggpairs_binhex(
  input_dt,
  output_file_prefix,
  width = 12,
  height = 12,
  bins = 50,
  xlab = "x",
  ylab = "y",
  title = "",
  cut = NULL,
  size = 0.5,
  thresholds = NULL
)

Arguments

input_dt	input data table (required)
output_file_prefix	plot output path prefix (required)
width	plot width (default: 12)
height	plot height (default: 12)
bins	number of hexagon bins (default: 50)
xlab	the title of the x-axis
ylab	the title of the y-axis
title	the plot title
cut	a factor variable to colour the hexagon outlines (optional)
size	line width of hex bins when 'cut' specified (default: 0.5)
thresholds	named list of thresholds where item is numeric (list) of thresholds and name is linetype (optional)

Value

Nothing

lehner-lab/DiMSum documentation built on April 5, 2025, 10:06 p.m.