Files in mar-esther23/rgriffin
Gene Regulatory Interaction Formulator For Inquiring Networks
.github/workflows/draft-pdf.yml
DESCRIPTION
LICENSE
NAMESPACE
R/boolnetToGriffin.R
R/createQuery.R
R/createQueryAttractors.R
R/getBasins.R
R/griffinToBoolnet.R
R/helperGriffin.R
R/runQuery.R
R/zzz.R
README.md
TODO
docker-rgriffin.md
inst/java/INSTALL.TXT
inst/java/LICENSE
inst/java/README
inst/java/RELEASE
inst/java/bin/griffin0.1.6.jar
inst/java/bin/resilience.jar
inst/java/conf/griffin.properties
inst/java/conf/log4j.properties
inst/java/edit/griffin.lang
inst/java/griffin
inst/java/griffin-attr
inst/java/griffin-basins
inst/java/griffin-cross-distances
inst/java/griffin-resilience
inst/java/jvm-param.R
inst/java/lib/APACHE-LICENSE
inst/java/lib/ECLIPSE-LICENSE
inst/java/lib/EJML-core-0.29-sources.jar
inst/java/lib/EJML-core-0.29.jar
inst/java/lib/EJML-dense64-0.29-sources.jar
inst/java/lib/EJML-dense64-0.29.jar
inst/java/lib/EJML-denseC64-0.29-sources.jar
inst/java/lib/EJML-denseC64-0.29.jar
inst/java/lib/EJML-equation-0.29-sources.jar
inst/java/lib/EJML-equation-0.29.jar
inst/java/lib/EJML-simple-0.29-sources.jar
inst/java/lib/EJML-simple-0.29.jar
inst/java/lib/GNU-GPL-LICENSE
inst/java/lib/antlr4-runtime-4.5.jar
inst/java/lib/beedeedee.jar
inst/java/lib/boolparser-1.0.0.jar
inst/java/lib/commons-beanutils-1.8.3.jar
inst/java/lib/commons-beanutils-bean-collections-1.8.3.jar
inst/java/lib/commons-beanutils-core-1.8.3.jar
inst/java/lib/commons-cli-1.3.1.jar
inst/java/lib/commons-lang3-3.1.jar
inst/java/lib/julia-annotations-1.9.20.jar
inst/java/lib/log4j-1.2.17.jar
inst/java/lib/mockito-all-1.9.5.jar
inst/java/lib/org.sat4j.core.jar
inst/java/lib/r-griffin.jar
inst/java/log/grn.log
inst/java/query-griffin
man/.Rhistory
man/addGqueryAttractors.Rd
man/addGqueryCycle.Rd
man/addGqueryMutant.Rd
man/addGqueryProhibitedAttractors.Rd
man/addGquerySteadyStates.Rd
man/addGqueryTransition.Rd
man/addGqueryTrapspace.Rd
man/attractorToDataframe.Rd
man/boolnetModelIterator.Rd
man/createGqueryGraph.Rd
man/dataframeToAttractor.Rd
man/dot-onLoad.Rd
man/getBasins.Rd
man/getInteractionSign.Rd
man/getNetTopology.Rd
man/griffinModelIterator.Rd
man/initGriffin.Rd
man/int2binState.Rd
man/print.jobjRef.Rd
man/runGquery.Rd
man/stringToBoolnet.Rd
man/validateStates.Rd
paper.bib
paper.md
rgriffin.Rproj
tests/testthat.R
tests/testthat/log/grn.log
tests/testthat/test_rgriffin.R
vignettes/log/grn.log
vignettes/rGriffinVignette.R
vignettes/rGriffinVignette.Rmd
vignettes/rGriffinVignette.html
vignettes/rGriffinVignette.pdf
