addGqueryCycle: Add target cycle to a Griffin query.

In mar-esther23/rgriffin: Gene Regulatory Interaction Formulator For Inquiring Networks

Description

Add a target cyclic attractor to a Griffin query. The function takes a dataframe with the states of the cycle where wach row corresponds to a state in order and each column corresponds to a node of the network The valid values are: 1: active 0: inactive *: non-determined

Usage

addGqueryCycle(j.query, df.cycle)

Arguments

j.query	Griffin query
df.cycle	dataframe with cycle

Value

query java query to run Griffin

Examples

cycle = data.frame(a=c(0,0), b=c(0,1), c=c(1,0),
                  stringsAsFactors = F )
q = addGqueryCycle(q, cycle)

mar-esther23/rgriffin documentation built on May 29, 2021, 10:03 p.m.