addGqueryTransition: Add a transition between two states to a Griffin query.
In mar-esther23/rgriffin: Gene Regulatory Interaction Formulator For Inquiring Networks
Description
Usage
Arguments
Value
Examples
Description
Add a transition between two states to a Griffin query.
The function takes a dataframe with the steady states
where wach row corresponds to a steady state and
each column corresponds to a node of the network
The valid values are:
1: active
0: inactive
*: non-determined
Usage
1
addGqueryTransition(j.query, df.transition)
Arguments
j.query
Griffin query
df.transition
dataframe with valid states in order
Value
query java query to run Griffin
Examples
1
2
3
transition = data.frame(a=c(1,1), b=c(0,1), c=c(0,0),
stringsAsFactors = F )
q = addGqueryTransition(q, transition)
mar-esther23/rgriffin documentation built on May 29, 2021, 10:03 p.m.
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Description Usage Arguments Value Examples
Description
Add a transition between two states to a Griffin query. The function takes a dataframe with the steady states where wach row corresponds to a steady state and each column corresponds to a node of the network The valid values are: 1: active 0: inactive *: non-determined
Usage
1 | addGqueryTransition(j.query, df.transition)
|
Arguments
j.query |
Griffin query |
df.transition |
dataframe with valid states in order |
Value
query java query to run Griffin
Examples
1 2 3 | transition = data.frame(a=c(1,1), b=c(0,1), c=c(0,0),
stringsAsFactors = F )
q = addGqueryTransition(q, transition)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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