masato-ogishi/Repitope: Epitope prediction from TCR-peptide contact profiles
Version 0.6.0

In sillico prediction of peptide immunogenicity is a critical component of precision immunotherapy. Although sequence-based prediction models have been extensively investigated, none of those tools achieved meaningful accuracy. Here, we developped a framework, termed 'repertoire-wide TCR-peptide contact profile', that enables accurate distinction between epitopes (immunogenic MHC-loaded peptides) and MHC ligands (non-immunogenic MHC-loaded peptides).

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Package details

AuthorMasato Ogishi
MaintainerMasato Ogishi <[email protected]>
LicenseMIT + file LICENSE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
masato-ogishi/Repitope documentation built on Feb. 25, 2018, 3:24 a.m.