Dataset_EpitopeDataset: Compiled datasets of MHC class I and class II epitopes and...

In masato-ogishi/Repitope: Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling

Compiled datasets of MHC class I and class II epitopes and ligands.

Description

Datasets were compiled from source files attached in the package using Epitope_Import.

Usage

MHCI_Human

MHCI_Rodents

MHCI_Primates

MHCII_Human

MHCII_Rodents

MHCII_Primates

MHCI_Human_MinimumFeatureSet

MHCII_Human_MinimumFeatureSet

Format

data.table

An object of class data.table (inherits from data.frame) with 8756 rows and 9 columns.

An object of class data.table (inherits from data.frame) with 411 rows and 9 columns.

An object of class data.table (inherits from data.frame) with 31693 rows and 9 columns.

An object of class data.table (inherits from data.frame) with 8445 rows and 9 columns.

An object of class data.table (inherits from data.frame) with 76 rows and 9 columns.

Character vectors containing 32 and 27 feature names for HLA-I and HLA-II, respectively.

An object of class character of length 27.

masato-ogishi/Repitope documentation built on Feb. 14, 2023, 5:47 a.m.