compareDsets: Column wise comparison of two datasets This function finds...

In mensxmachina/BioDataome: Functions used to preprocess datasets stored in BioDataome

Description

Column wise comparison of two datasets This function finds how many samples are shared between two datasets. The datasets are in the form variables (probes) x samples. The number of variables (probes) in both datasets should be the same Let us assume we want to compare two normalized gene expression datasets from the same platform

Usage

compareDsets(d1, d2)

Arguments

d1	a numeric matrix of a dataset
d2	a numeric matrix of a dataset

Value

the number of equal samples

Examples

d1<-get(load(url("http://dataome.mensxmachina.org/data/Homo%20sapiens/GPL570/GSE86013.Rda")))
d2<-get(load(url("http://dataome.mensxmachina.org/data/Homo%20sapiens/GPL570/GSE86015.Rda")))
commons<-compareDsets(d1,d2)

mensxmachina/BioDataome documentation built on July 24, 2021, 1:05 p.m.