curateRecountRNASeq: Run all steps to download, preprocess and annotate an RNASeq...

In mensxmachina/BioDataome: Functions used to preprocess datasets stored in BioDataome

Description

Run all steps to download, preprocess and annotate an RNASeq dataset from Recount

Usage

curateRecountRNASeq(x, y)

Arguments

x	a recount dataset ID
y	the path to write the output

Value

writes in the given path two data frames, the preprocessed data and the metadata file with phenotype information

Examples

## Not run: 
curatedRecount<-curateRecountRNASeq("SRP032775",getwd()) 
## End(Not run)

mensxmachina/BioDataome documentation built on July 24, 2021, 1:05 p.m.