downloadPhenotype: Download series matrices from GEO for a given study
In mensxmachina/BioDataome: Functions used to preprocess datasets stored in BioDataome
Description
Usage
Arguments
Value
Examples
View source: R/downloadPhenotype.R
Description
This function downlads all series matrices related to a given GEO Series (GSE)
and saves them in a list.
The same GSE study (i.e. GSE11761) may be related to more than one platforms (i.e GPL570 and GPL1261).
The length of the output list is the number of the related platforms.
Usage
1
Arguments
x
a GEO Series id (GSE)
Value
a list of series matrices related to the given study
Examples
1
2
3
4
## Not run:
downloadPhenotype("GSE11761")
## End(Not run)
p<- BioDataome:::phenos
mensxmachina/BioDataome documentation built on July 24, 2021, 1:05 p.m.
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Description Usage Arguments Value Examples
View source: R/downloadPhenotype.R
Description
This function downlads all series matrices related to a given GEO Series (GSE) and saves them in a list. The same GSE study (i.e. GSE11761) may be related to more than one platforms (i.e GPL570 and GPL1261). The length of the output list is the number of the related platforms.
Usage
1 |
Arguments
x |
a GEO Series id (GSE) |
Value
a list of series matrices related to the given study
Examples
1 2 3 4 | ## Not run:
downloadPhenotype("GSE11761")
## End(Not run)
p<- BioDataome:::phenos
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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