PerformSanityCheck: Perform sanity check of collapsed transcriptome.
In mevers/RNAModR: Functional Analysis of RNA Modifications
Description
Usage
Arguments
Details
Author(s)
View source: R/buildTxMethods.R
Description
Perform sanity check of collapsed transcriptome. See 'Details'.
This is a low-level function that is being called from
BuildTx.
Usage
1
PerformSanityCheck(txBySec)
Arguments
txBySec
A list of GRangesList objects;
output of function GetTxBySec or CollapseTxBySec.
Details
The function checks for entries with duplicate RefSeq IDs
across a list of transcripts sections. For example, the return
object of CollapseTxBySec should contain transcript
segments for every transcript section with a unique RefSeq ID.
Author(s)
Maurits Evers, maurits.evers@anu.edu.au
mevers/RNAModR documentation built on Nov. 17, 2019, 9:11 a.m.
R Package Documentation
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Description Usage Arguments Details Author(s)
View source: R/buildTxMethods.R
Description
Perform sanity check of collapsed transcriptome. See 'Details'.
This is a low-level function that is being called from
BuildTx.
Usage
1 | PerformSanityCheck(txBySec)
|
Arguments
txBySec |
A |
Details
The function checks for entries with duplicate RefSeq IDs
across a list of transcripts sections. For example, the return
object of CollapseTxBySec should contain transcript
segments for every transcript section with a unique RefSeq ID.
Author(s)
Maurits Evers, maurits.evers@anu.edu.au
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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