GetRelDistNearest: Return list of nearest distances between entries from two...
In mevers/RNAModR: Functional Analysis of RNA Modifications
Description
Usage
Arguments
Details
Value
Author(s)
Description
Return list of nearest distances between entries from two lists of
GRanges objects. See 'Details'.
Usage
1
GetRelDistNearest(lst1, lst2)
Arguments
lst1
A list of GRanges object.
lst2
A list of GRanges object.
Details
The function uses GenomicRanges::distanceToNearest to return the
nearest distances between the start positions of a GRanges object
from lst1 and the corresponding GRanges object from
lst2 with the same name (based on field seqnames).
Note that distances are given as signed integers: Negative
distances correspond to pos(gr1) < pos(gr2), positive
distances correspond to pos(gr1) > pos(gr2).
Value
A list of integer vectors. See 'Details'.
Author(s)
Maurits Evers, maurits.evers@anu.edu.au
mevers/RNAModR documentation built on Nov. 17, 2019, 9:11 a.m.
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Description Usage Arguments Details Value Author(s)
Description
Return list of nearest distances between entries from two lists of
GRanges objects. See 'Details'.
Usage
1 | GetRelDistNearest(lst1, lst2)
|
Arguments
lst1 |
A |
lst2 |
A |
Details
The function uses GenomicRanges::distanceToNearest to return the
nearest distances between the start positions of a GRanges object
from lst1 and the corresponding GRanges object from
lst2 with the same name (based on field seqnames).
Note that distances are given as signed integers: Negative
distances correspond to pos(gr1) < pos(gr2), positive
distances correspond to pos(gr1) > pos(gr2).
Value
A list of integer vectors. See 'Details'.
Author(s)
Maurits Evers, maurits.evers@anu.edu.au
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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