plotSNVReplicateOverlap: Plot the overlap of identified Variants between replicates
In mffrank/RNAseqToCustomFASTA: Produce Custom Protein Fasta Databases from RNAseq Data
View source: R/prepareVariants.R
Description
Plot the overlap of identified Variants between replicates
Usage
1
2
plotSNVReplicateOverlap(vcf_dir = vcf_directory, pattern = ".vcf$",
outfile = "SNVReplicate_overlap.tiff")
Arguments
vcf_dir
Path to folder with all replicate vcf files
pattern
pattern to match
mffrank/RNAseqToCustomFASTA documentation built on May 22, 2019, 7:55 p.m.
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View source: R/prepareVariants.R
Description
Plot the overlap of identified Variants between replicates
Usage
1 2 | plotSNVReplicateOverlap(vcf_dir = vcf_directory, pattern = ".vcf$",
outfile = "SNVReplicate_overlap.tiff")
|
Arguments
vcf_dir |
Path to folder with all replicate vcf files |
pattern |
pattern to match |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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