Files in mi2-warsaw/sequencingExplainer

Package directRNAExplorer is an R package for dealing with the RNA sequencing data.

.Rbuildignore

.gitignore

.travis.yml

DESCRIPTION

NAMESPACE

R/Araport11.R R/TAIR10_genes.R R/TAIR10_genes_tidy.R R/bamToR.R R/brmDataChromosome1.R R/countsAll.R R/countsForAllGenes.R R/countsInGene.R R/countsPerGene.R R/dataChromosome1.R R/dataChromosome2.R R/edgerTest.R R/genesSumarize.R R/ksDistributionTest.R R/matchToGene.R R/nbinomTest.R R/plotCoverage.R R/plotGeneComparisonDistribution.R R/plotGeneDistribution.R R/plotHistogram.R R/plotPoints.R R/pvalTable.R R/tTest.R R/tools.R README.md

_pkgdown.yml

data/Araport11.rda

data/TAIR10_genes.rda

data/TAIR10_genes_tidy.rda

data/brmDataChromosome1.rda

data/countsAll.rda

data/dataChromosome1.rda

data/dataChromosome2.rda

docs/MI2logo.jpg

docs/articles/Package_presentation.html

docs/articles/Package_presentation_files/figure-html/unnamed-chunk-10-1.png

docs/articles/Package_presentation_files/figure-html/unnamed-chunk-8-1.png

docs/articles/Package_presentation_files/figure-html/unnamed-chunk-8-2.png

docs/articles/Package_presentation_files/figure-html/unnamed-chunk-9-1.png

docs/articles/Package_presentation_files/figure-html/unnamed-chunk-9-2.png

docs/articles/index.html

docs/articles/testEdger.html

docs/authors.html

docs/index.html

docs/jquery.sticky-kit.min.js

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/Araport11.html

docs/reference/TAIR10_genes.html

docs/reference/TAIR10_genes_tidy.html

docs/reference/bamToR.html

docs/reference/brmDataChromosome1.html

docs/reference/countsAll.html

docs/reference/countsForAllGenes.html

docs/reference/countsPerGene.html

docs/reference/dataChromosome1.html

docs/reference/dataChromosome2.html

docs/reference/edgerTest.html

docs/reference/genesSummarize.html

docs/reference/index.html

docs/reference/ksDistributionTest.html

docs/reference/matchToGene.html

docs/reference/nbinomTest.html

docs/reference/plotCoverage-1.png

docs/reference/plotCoverage.html

docs/reference/plotGeneComparisonDistribution.html

docs/reference/plotGeneDistribution-1.png

docs/reference/plotGeneDistribution.html

docs/reference/plotHistogram.html

docs/reference/plotPoints.html

docs/reference/pvalTable.html

docs/reference/tTest.html

man/Araport11.Rd man/TAIR10_genes.Rd man/TAIR10_genes_tidy.Rd man/bamToR.Rd man/brmDataChromosome1.Rd man/countsAll.Rd man/countsForAllGenes.Rd man/countsPerGene.Rd man/dataChromosome1.Rd man/dataChromosome2.Rd man/edgerTest.Rd man/genesSummarize.Rd man/ksDistributionTest.Rd man/matchToGene.Rd man/nbinomTest.Rd man/plotCoverage.Rd man/plotGeneComparisonDistribution.Rd man/plotGeneDistribution.Rd man/plotHistogram.Rd man/plotPoints.Rd man/pvalTable.Rd man/tTest.Rd tests/testthat.R tests/testthat/testbamToR.R tests/testthat/testgenesSummarize.R tests/testthat/testksDistributionTest.R tests/testthat/testplotGeneDistribution.R vignettes/Package_presentation.Rmd

vignettes/Package_presentation.html

vignettes/countsAll.rda

vignettes/countsAll_new.rda

vignettes/testEdger.Rmd vignettes/testEdger.pdf

mi2-warsaw/sequencingExplainer documentation built on May 17, 2019, 4:33 p.m.