API for michaeldshapiro/deltaCaptureC
This Package Discovers Meso-scale Chromatin Remodeling from 3C Data
| Global functions | |
|---|---|
| .getRunsAndTotals | Man page Source code |
| bigBinSize | Man page |
| binSummarizedExperiment | Man page Source code |
| binnedDeltaPlot | Man page |
| binnedDeltaSE | Man page |
| binnedSummarizedExperiment | Man page |
| deltaSE | Man page |
| downshiftDFtoMatrix | Man page Source code |
| generatePermutation | Man page Source code |
| getDeltaSE | Man page Source code |
| getLopsidedness | Man page Source code |
| getMeanNormalizedCountsSE | Man page Source code |
| getNormalizedCountsSE | Man page Source code |
| getOverlapWeights | Man page Source code |
| getPValueCutoff | Man page Source code |
| getRunAndLopsidednessStatistics | Man page Source code |
| getRunStatistics | Man page Source code |
| getRunStatisticsDist | Man page Source code |
| getRunTotals | Man page Source code |
| getSignificantRegions | Man page Source code |
| getSizeFactorsDF | Man page Source code |
| getSizeFactorsSE | Man page Source code |
| miniDeltaSE | Man page |
| miniSE | Man page |
| miniSEDF | Man page |
| numPermutations | Man page |
| pValue | Man page |
| plotSignificantRegions | Man page Source code |
| plotTitle | Man page |
| rebinToMultiple | Man page Source code |
| regionOfInterest | Man page |
| significanceType | Man page |
| significantRegions | Man page |
| significantRegionsPlot | Man page |
| smallBinSize | Man page |
| smallBins | Man page |
| smallSetOfSmallBins | Man page |
| smallerDeltaSE | Man page |
| viewpointRegion | Man page |
| weightsExampleBins | Man page |
| weightsExampleGr | Man page |
