getRunStatisticsDist: This takes a list of (scrambled) runs and returns their run...

In michaeldshapiro/deltaCaptureC: This Package Discovers Meso-scale Chromatin Remodeling from 3C Data

This takes a list of (scrambled) runs and returns their run statistics

Description

This function takes a list of (scrambled) runs and extracts their run totals as a matrix with colnames 'min','max' and 'abs', the latter being the max of the absolute values of the previous two

Usage

getRunStatisticsDist(runTotalsList)

Arguments

runTotalsList

this is a list whose members are GRanges objects giving the consecutive runs and their totals

Value

a Nx3 matrix giving the min, max and max(abs(min),abs(max)) run totals

michaeldshapiro/deltaCaptureC documentation built on April 21, 2023, 8:18 a.m.