getSizeFactorsDF: Get the size factors for count normalization
In michaeldshapiro/deltaCaptureC: This Package Discovers Meso-scale Chromatin Remodeling from 3C Data
View source: R/deltaCaptureC.R
getSizeFactorsDF R Documentation
Get the size factors for count normalization
Description
This function takes a data frame giving chr, start, end and count for experimental
replicates and returns the size factors for each of the replicates for use in
normalization
Usage
getSizeFactorsDF(countsDF)
Arguments
countsDF
A data frame whose first three columns are chr, start and end, and
whose remaining columns are count data for experimental replicates
Value
The size factors for the columns of countsDF
Examples
sf = getSizeFactorsDF(miniSEDF)
michaeldshapiro/deltaCaptureC documentation built on April 21, 2023, 8:18 a.m.
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View source: R/deltaCaptureC.R
| getSizeFactorsDF | R Documentation |
Get the size factors for count normalization
Description
This function takes a data frame giving chr, start, end and count for experimental replicates and returns the size factors for each of the replicates for use in normalization
Usage
getSizeFactorsDF(countsDF)
Arguments
countsDF |
A data frame whose first three columns are chr, start and end, and whose remaining columns are count data for experimental replicates |
Value
The size factors for the columns of countsDF
Examples
sf = getSizeFactorsDF(miniSEDF)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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