Files in michaeldshapiro/deltaCaptureC
This Package Discovers Meso-scale Chromatin Remodeling from 3C Data

.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/deltaCaptureC.R
data/bigBinSize.rda
data/binnedDeltaPlot.rda
data/binnedDeltaSE.rda
data/binnedSummarizedExperiment.rda
data/deltaSE.rda
data/miniDeltaSE.rda
data/miniSE.rda
data/miniSEDF.rda
data/numPermutations.rda
data/pValue.rda
data/plotTitle.rda
data/regionOfInterest.rda
data/significanceType.rda
data/significantRegions.rda
data/significantRegionsPlot.rda
data/smallBinSize.rda
data/smallBins.rda
data/smallSetOfSmallBins.rda
data/smallerDeltaSE.rda
data/viewpointRegion.rda
data/weightsExampleBins.rda
data/weightsExampleGr.rda
inst/CITATION
man/bigBinSize.Rd man/binSummarizedExperiment.Rd man/binnedDeltaPlot.Rd man/binnedDeltaSE.Rd man/binnedSummarizedExperiment.Rd man/deltaSE.Rd man/dot-getRunsAndTotals.Rd man/downshiftDFtoMatrix.Rd man/generatePermutation.Rd man/getDeltaSE.Rd man/getLopsidedness.Rd man/getMeanNormalizedCountsSE.Rd man/getNormalizedCountsSE.Rd man/getOverlapWeights.Rd man/getPValueCutoff.Rd man/getRunAndLopsidednessStatistics.Rd man/getRunStatistics.Rd man/getRunStatisticsDist.Rd man/getRunTotals.Rd man/getSignificantRegions.Rd man/getSizeFactorsDF.Rd man/getSizeFactorsSE.Rd man/miniDeltaSE.Rd man/miniSE.Rd man/miniSEDF.Rd man/numPermutations.Rd man/pValue.Rd man/plotSignificantRegions.Rd man/plotTitle.Rd man/rebinToMultiple.Rd man/regionOfInterest.Rd man/significanceType.Rd man/significantRegions.Rd man/significantRegionsPlot.Rd man/smallBinSize.Rd man/smallBins.Rd man/smallSetOfSmallBins.Rd man/smallerDeltaSE.Rd man/viewpointRegion.Rd man/weightsExampleBins.Rd man/weightsExampleGr.Rd
vignettes/.gitignore
vignettes/deltaCaptureC.Rmd
michaeldshapiro/deltaCaptureC documentation built on April 21, 2023, 8:18 a.m.