Files in michaeldshapiro/deltaCaptureC
This Package Discovers Meso-scale Chromatin Remodeling from 3C Data
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/deltaCaptureC.R
data/bigBinSize.rda
data/binnedDeltaPlot.rda
data/binnedDeltaSE.rda
data/binnedSummarizedExperiment.rda
data/deltaSE.rda
data/miniDeltaSE.rda
data/miniSE.rda
data/miniSEDF.rda
data/numPermutations.rda
data/pValue.rda
data/plotTitle.rda
data/regionOfInterest.rda
data/significanceType.rda
data/significantRegions.rda
data/significantRegionsPlot.rda
data/smallBinSize.rda
data/smallBins.rda
data/smallSetOfSmallBins.rda
data/smallerDeltaSE.rda
data/viewpointRegion.rda
data/weightsExampleBins.rda
data/weightsExampleGr.rda
inst/CITATION
man/bigBinSize.Rd
man/binSummarizedExperiment.Rd
man/binnedDeltaPlot.Rd
man/binnedDeltaSE.Rd
man/binnedSummarizedExperiment.Rd
man/deltaSE.Rd
man/dot-getRunsAndTotals.Rd
man/downshiftDFtoMatrix.Rd
man/generatePermutation.Rd
man/getDeltaSE.Rd
man/getLopsidedness.Rd
man/getMeanNormalizedCountsSE.Rd
man/getNormalizedCountsSE.Rd
man/getOverlapWeights.Rd
man/getPValueCutoff.Rd
man/getRunAndLopsidednessStatistics.Rd
man/getRunStatistics.Rd
man/getRunStatisticsDist.Rd
man/getRunTotals.Rd
man/getSignificantRegions.Rd
man/getSizeFactorsDF.Rd
man/getSizeFactorsSE.Rd
man/miniDeltaSE.Rd
man/miniSE.Rd
man/miniSEDF.Rd
man/numPermutations.Rd
man/pValue.Rd
man/plotSignificantRegions.Rd
man/plotTitle.Rd
man/rebinToMultiple.Rd
man/regionOfInterest.Rd
man/significanceType.Rd
man/significantRegions.Rd
man/significantRegionsPlot.Rd
man/smallBinSize.Rd
man/smallBins.Rd
man/smallSetOfSmallBins.Rd
man/smallerDeltaSE.Rd
man/viewpointRegion.Rd
man/weightsExampleBins.Rd
man/weightsExampleGr.Rd
vignettes/.gitignore
vignettes/deltaCaptureC.Rmd
