Files in michalstolarczyk/BALCONY
Better ALignment CONsensus analYsis
.DS_Store
.github/ISSUE_TEMPLATE/bug_report.md
.gitignore
DESCRIPTION
NAMESPACE
R/conservationFuncs.R
R/const.R
R/dataDocs.R
R/structureFuncs.R
R/utils.R
README.md
data/alignment.RData
data/gonnet.RData
data/small_alignment.RData
data/structure.RData
inst/extdata/4jnc.pdb
inst/extdata/GONNET.txt
inst/extdata/T1_4JNC.structure
inst/extdata/T2_4JNC.structure
inst/extdata/T3_4JNC.structure
inst/extdata/aln2_312_pro.fasta
man/.DS_Store
man/CRE_conservativity.Rd
man/D_matrix.Rd
man/Escore_conservativity.Rd
man/RealValET_conservativity.Rd
man/align_seq_mtx2grs.Rd
man/alignment.Rd
man/alignment2matrix.Rd
man/barplotshow.Rd
man/calculate_AA_variation.Rd
man/calculate_pseudo_counts.Rd
man/compare_cons_metrics.Rd
man/cons2seqs_ident.Rd
man/cons2seqs_sim.Rd
man/consensus.Rd
man/convert_AA_symbol.Rd
man/create_final_CSV.Rd
man/create_structure_seq.Rd
man/delete_isoforms.Rd
man/dot-apply_pseudocounts_position.Rd
man/excl_low_prob_strcts.Rd
man/find_consecutive_seq.Rd
man/find_seq.Rd
man/find_seqid.Rd
man/get_align_params.Rd
man/get_pos_based_seq_weights.Rd
man/get_prot_entropy.Rd
man/get_remarks465_pdb.Rd
man/get_seq_weights.Rd
man/get_structures_entropy.Rd
man/get_structures_idx.Rd
man/gonnet.Rd
man/kabat_conservativity.Rd
man/kolmogorov_smirnov_test.Rd
man/landgraf_conservativity.Rd
man/noteworthy_seqs.Rd
man/pairwise_alignment_MSA.Rd
man/plot_entropy.Rd
man/plot_structure_on_protein.Rd
man/prepare_structure_profile.Rd
man/read_structure.Rd
man/schneider_conservativity.Rd
man/shannon_conservativity.Rd
man/small_alignment.Rd
man/structure.Rd
man/substitution_mtx.Rd
