small_alignment: Sample small alignment of soluable epoxide hydrolase family
In michalstolarczyk/BALCONY: Better ALignment CONsensus analYsis
Description
Format
Details
Value
Examples
Description
This alignment consists of 10 proteins which belong to the soluable epoxide hydrolase family. The amino acid sequences were aligned using MUSCLE algorithm with default settings.
Format
An alignment object read with read.alignment function from seqinr package.
- nam
A vector of characters: names of the sequences
- nb
A numeric: number of sequences
- seq
A vector of characters: amino acid sequences
Details
This is a smaller version of sample alignment which facilitates faster presentation of the functions capabilities.
Value
A character vector of length of the aligned sequence containing consesus sequence based on the input alignment
Examples
1
2
data("small_alignment")
small_alignment
michalstolarczyk/BALCONY documentation built on May 7, 2019, 6:08 a.m.
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Description Format Details Value Examples
Description
This alignment consists of 10 proteins which belong to the soluable epoxide hydrolase family. The amino acid sequences were aligned using MUSCLE algorithm with default settings.
Format
An alignment object read with read.alignment function from seqinr package.
- nam
A vector of characters: names of the sequences
- nb
A numeric: number of sequences
- seq
A vector of characters: amino acid sequences
Details
This is a smaller version of sample alignment which facilitates faster presentation of the functions capabilities.
Value
A character vector of length of the aligned sequence containing consesus sequence based on the input alignment
Examples
1 2 | data("small_alignment")
small_alignment
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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