get_seq_weights: Get sequences weights
In michalstolarczyk/BALCONY: Better ALignment CONsensus analYsis
Description
Usage
Arguments
Value
References
Examples
Description
This function returns weights of the sequneces in the alignment object
Usage
1
Arguments
alignment
data loaded with read.alignment
Value
A vector with weights of length equal to the number of sequences in the alignment
References
Valdar, W. S. J. & Thornton, J. M. Protein–protein interfaces: Analysis of amino acid conservation in homodimers. Proteins: Structure, Function, and Bioinformatics 42, 108–124 (2001).
Examples
1
2
3
data("small_alignment")
alignment = small_alignment
weights = get_seq_weights(alignment)
michalstolarczyk/BALCONY documentation built on May 7, 2019, 6:08 a.m.
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Description Usage Arguments Value References Examples
Description
This function returns weights of the sequneces in the alignment object
Usage
1 |
Arguments
alignment |
data loaded with |
Value
A vector with weights of length equal to the number of sequences in the alignment
References
Valdar, W. S. J. & Thornton, J. M. Protein–protein interfaces: Analysis of amino acid conservation in homodimers. Proteins: Structure, Function, and Bioinformatics 42, 108–124 (2001).
Examples
1 2 3 | data("small_alignment")
alignment = small_alignment
weights = get_seq_weights(alignment)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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