substitution_mtx: Read a substitution matrix
In michalstolarczyk/BALCONY: Better ALignment CONsensus analYsis
Description
Usage
Arguments
Value
Examples
Description
This function facilitates reading of substitution matrices for further use
Usage
1
substitution_mtx(matrix_name)
Arguments
matrix_name
A string with path to the substitution matrix in a text file to be read
Value
names
A vector of characters with amino acid names included in the matrix
matrix
A numeric matrix with values
Examples
1
2
path = system.file("extdata", "GONNET.txt", package = "BALCONY")
sub_mat = substitution_mtx(path)
michalstolarczyk/BALCONY documentation built on May 7, 2019, 6:08 a.m.
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Description Usage Arguments Value Examples
Description
This function facilitates reading of substitution matrices for further use
Usage
1 | substitution_mtx(matrix_name)
|
Arguments
matrix_name |
A string with path to the substitution matrix in a text file to be read |
Value
names |
A vector of characters with amino acid names included in the matrix |
matrix |
A numeric matrix with values |
Examples
1 2 | path = system.file("extdata", "GONNET.txt", package = "BALCONY")
sub_mat = substitution_mtx(path)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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