taxa_distribution: Distribution of taxa

In microsud/microbiomeutilities: microbiomeutilities: Utilities for Microbiome Analytics

Distribution of taxa

Description

Plots distribution of taxa.

Usage

taxa_distribution(
  x,
  color.level = "Phylum",
  color.taxa = brewer.pal(12, "Paired")
)

Arguments

x	phyloseq-class object
color.level	Taxonomic level to color
color.taxa	vector of colors specified by user Default is brewer.pal(12,"Paired")

Value

ggplot2 object

Examples

library(microbiomeutilities)
data("zackular2014")
pseq <- zackular2014
p <- taxa_distribution(pseq)
p

microsud/microbiomeutilities documentation built on Nov. 29, 2022, 12:18 a.m.