Man pages for morris-lab/CloneHunter
Identify Clonal Identity from ScRNA-Seq and CellTag Data
| bam.process | Bam File Process Function |
| CellTagDataForCollapsing | CellTag Starcode Prior Collapsing |
| CellTagDataPostCollapsing | CellTag Starcode Post Collapsing |
| CellTagExtraction | CellTag Extraction Function |
| CellTagMatrixCount | CellTag Matrix Generation Function |
| CellTagWhitelistFiltering | CellTag Whitelist Filtering Function |
| CloneCalling | Clone Calling Function |
| fastq.process | Fastq Process Function |
| JaccardAnalysis | Jaccard Analysis Function |
| MetricBasedFiltering | Metric-Base Filtering Function |
| MetricPlots | CellTag Metric Plotting Function |
| SingleCellDataBinarization | Single-cell RNA-seq Whitelisting Function |
| SingleCellDataWhitelist | Single-cell RNA-seq Whitelisting Function |
