SingleCellDataWhitelist: Single-cell RNA-seq Whitelisting Function

In morris-lab/CloneHunter: Identify Clonal Identity from ScRNA-Seq and CellTag Data

Description

This function conducts whitelist filtering through the single-cell dataset

Usage

SingleCellDataWhitelist(celltag.dat, whitels.cell.tag.file)

Arguments

celltag.dat	binarized celltag single-cell data matrix
whitels.cell.tag.file	file director to the whitelisted cell tags

Value

Whitelisted single-cell dataset

Examples

SingleCellDataWhitelist(sc.mtx, "~/Desktop/My_Favourite_Whitelist.csv", 2)

morris-lab/CloneHunter documentation built on June 12, 2019, 11:01 a.m.