JaccardAnalysis: Jaccard Analysis Function

Description Usage Arguments Value Examples

View source: R/CellTagCloneCalling_Function.R

Description

This function conducts Jaccard analysis to calculate the Jaccard similarity between cells

Usage

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JaccardAnalysis(whitelisted.celltag.data, save.mtx = TRUE,
  plot.corr = TRUE, save.plot = TRUE)

Arguments

whitelisted.celltag.data

The single-cell data with whitelisted celltag.

save.mtx

Would you like to save the jaccard matrix? Default to TRUE. Save the matrix to the working directory.

plot.corr

Would you like to plot the correlation matrix?

save.plot

Would you like to save the plot? Save the plot to the working directory.

Value

The jaccard matrix

Examples

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JaccardAnalysis(celltags.whitelisted)

morris-lab/CloneHunter documentation built on Jan. 6, 2019, 3:04 a.m.