run_xpvwrh: Run odin model of gonorrhoea with or without vaccination

In mrc-ide/gonovax: Deterministic Compartmental Model of Gonorrhoea with Vaccination

Run odin model of gonorrhoea with or without vaccination

Description

Run odin model of gonorrhoea with or without vaccination

Usage

run_xpvwrh(
  tt,
  gono_params,
  demographic_params = NULL,
  init_params = NULL,
  vax_params = NULL,
  n_erlang = 1,
  n_diag_rec = 1,
  years_history = 1,
  transform = TRUE
)

Arguments

tt	a numeric vector of times at which the model state is output
gono_params	a data frame of parameters
demographic_params	A dataframe of demographic parameters
init_params	A list of starting conditions
vax_params	A vector of vaccination params
n_erlang	integer giving the number of transitions that need to be made through vaccine-protected strata until that protection has waned
n_diag_rec	integer for the number of diagnosis history substrata
years_history	number of years that diagnosis history is recorded for
transform	= TRUE

mrc-ide/gonovax documentation built on Dec. 15, 2024, 11:02 a.m.