featureInfo: Retrieve info as data.table

Description Usage Arguments

View source: R/features.R

Description

Get data.table of metadata from RangedSummarizedExperiment or OutriderDataSet object

Usage

1
featureInfo(gr, columns = NULL, summary = F, rownumbers = F)

Arguments

gr

GRanges object or any object containing it (i.e. RangedSummarizedExperiment, OutriderDataSet), must support mcols function

columns

a character vector for selecting only a part of the mcols. If NULL then all the columns will be included

summary

include summary per feature over all samples, if TRUE

rownumbers

if TRUE, the row numbers will be included as columns "row"


mumichae/DASSIE documentation built on Jan. 10, 2020, 12:07 a.m.