getExonsDt: Get exons from txdb
In mumichae/DASSIE: Detection of Alternative Transcription Start Sites
Description
Usage
Arguments
Value
Description
Get exons from txdb
Usage
1
getExonsDt(txdb, filter_length = "tx_length", filter_exon = TRUE)
Arguments
filter_length
filter transcripts
'tx_length': by length of transcript
'gene_length': by length of gene
filter_exon
keep transcript with longest exons
Value
exons in a data.table convertible to GRanges object, contains
transcript and gene mapping
mumichae/DASSIE documentation built on Jan. 10, 2020, 12:07 a.m.
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Description Usage Arguments Value
Description
Get exons from txdb
Usage
1 | getExonsDt(txdb, filter_length = "tx_length", filter_exon = TRUE)
|
Arguments
filter_length |
filter transcripts 'tx_length': by length of transcript 'gene_length': by length of gene |
filter_exon |
keep transcript with longest exons |
Value
exons in a data.table convertible to GRanges object, contains transcript and gene mapping
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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