ProduceIGVSession: ProduceIGVSession Produces session file for 1 entry of coords...
In mumichae/DASSIE: Detection of Alternative Transcription Start Sites

Description Usage Arguments Value Author(s)

ProduceIGVSession Produces session file for 1 entry of coords data frame

ProduceIGVSession(
  region.params,
  indents = c(0, 0),
  bams.paths,
  refs.paths = data.table(paths = ""[0], name = ""[0]),
  max.matrix = data.table(),
  dir.path = tempdir()
)

`region.params`	row of coords data frame
`indents`	vector of the number of nucleotids to be displayed from the left and rigth of region of interest. Default value is c(0, 0)
`bams.paths`	vector, containing paths to bam files. The order matters: tracks will appear in igv according to the order of this vector
`refs.paths`	vector, containing paths to reference files. The order also matters.
`dir.path`	name of the folder to put results in