plot_spatial_GO_term: plot_spatial_GO_term
In mvhunter1/mvhspatialplots: Some improved functions for analysis of ST and GSEA data.
Description
Usage
Arguments
Value
View source: R/plot_spatial_GO_term.R
Description
add expression data for GO term to ST object metadata, and plot. Note: Seurat object for ABC must be loaded, and expression and pval matrices.
Usage
1
plot_spatial_GO_term(pathway_add, plot_tumor = T, plot_interface = F)
Arguments
pathway_add
GO pathway you want to plot.
plot_tumor
plot expression in tumor region?
plot_interface
plot expression in interface region?
Value
plot.
mvhunter1/mvhspatialplots documentation built on April 24, 2021, 10:52 a.m.
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Description Usage Arguments Value
View source: R/plot_spatial_GO_term.R
Description
add expression data for GO term to ST object metadata, and plot. Note: Seurat object for ABC must be loaded, and expression and pval matrices.
Usage
1 | plot_spatial_GO_term(pathway_add, plot_tumor = T, plot_interface = F)
|
Arguments
pathway_add |
GO pathway you want to plot. |
plot_tumor |
plot expression in tumor region? |
plot_interface |
plot expression in interface region? |
Value
plot.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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