fastwilcoxGMTall: Performs Wilcoxon Rank-Sum pathway enrichment on pathway...

View source: R/enrichmentFuncs.R

fastwilcoxGMTallR Documentation

Performs Wilcoxon Rank-Sum pathway enrichment on pathway genesets

Description

Performs Wilcoxon Rank-Sum pathway enrichment on pathway genesets

Usage

fastwilcoxGMTall(vals, annotList, alternative = "two.sided", ...)

Arguments

vals

The output from getStat run on RERconverge correlation functions (correlateWithContinuousPhenotype, correlateWithBinaryPhenotype, getAllCor)

annotList

Pathway annotations formatted as a list of lists of annotation information

Value

A list of pathways with enrichment statistics


nclark-lab/RERconverge documentation built on June 9, 2025, 6:02 a.m.