fastwilcoxGMTall: Performs Wilcoxon Rank-Sum pathway enrichment on pathway...
In nclark-lab/RERconverge: Analysis of Convergence Between Organismal Traits and DNA/Protein Sequences
View source: R/enrichmentFuncs.R
fastwilcoxGMTall R Documentation
Performs Wilcoxon Rank-Sum pathway enrichment on pathway genesets
Description
Performs Wilcoxon Rank-Sum pathway enrichment on pathway genesets
Usage
fastwilcoxGMTall(vals, annotList, ...)
Arguments
vals
The output from getStat run on RERconverge correlation functions (correlateWithContinuousPhenotype, correlateWithBinaryPhenotype, getAllCor)
annotList
Pathway annotations formatted as a list of lists of annotation information
Value
A list of pathways with enrichment statistics
nclark-lab/RERconverge documentation built on Feb. 4, 2025, 8:38 a.m.
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View source: R/enrichmentFuncs.R
| fastwilcoxGMTall | R Documentation |
Performs Wilcoxon Rank-Sum pathway enrichment on pathway genesets
Description
Performs Wilcoxon Rank-Sum pathway enrichment on pathway genesets
Usage
fastwilcoxGMTall(vals, annotList, ...)
Arguments
vals |
The output from getStat run on RERconverge correlation functions (correlateWithContinuousPhenotype, correlateWithBinaryPhenotype, getAllCor) |
annotList |
Pathway annotations formatted as a list of lists of annotation information |
Value
A list of pathways with enrichment statistics
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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