annotate_with_samtools_stats: Make annotations from samtools stats
In nf-osi/nfportalutils: NF Portal Utilities
annotate_with_samtools_stats R Documentation
Make annotations from samtools stats
Description
Extracts a subset of samtools stats
Regarding the selection of stats, see the Genomic Data Commons (GDC) model for
AlignedReads
Usage
annotate_with_samtools_stats(meta, samtools_stats_file = NULL)
Arguments
meta
Data to which tool stats will be added as additional meta.
samtools_stats_file
Path to file/syn id of file with samtools stats produced by the workflow.
nf-osi/nfportalutils documentation built on June 10, 2025, 5:08 a.m.
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| annotate_with_samtools_stats | R Documentation |
Make annotations from samtools stats
Description
Extracts a subset of samtools stats Regarding the selection of stats, see the Genomic Data Commons (GDC) model for AlignedReads
Usage
annotate_with_samtools_stats(meta, samtools_stats_file = NULL)
Arguments
meta |
Data to which tool stats will be added as additional meta. |
samtools_stats_file |
Path to file/syn id of file with samtools stats produced by the workflow. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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