cbp_new_cancer_type: Create reference file for new cancer type

In nf-osi/nfportalutils: NF Portal Utilities

Create reference file for new cancer type

Description

Helper for creating reference for new cancer subtype which does not already exist. https://docs.cbioportal.org/file-formats/#cancer-type

Usage

cbp_new_cancer_type(type_of_cancer, name, color, parent_type_of_cancer)

Arguments

type_of_cancer	Id for new cancer type, e.g. "cnf".
name	Full name for new cancer type, e.g. "Cutaneous Neurofibroma"
color	Color name for new cancer; https://en.wikipedia.org/wiki/Web_colors#X11_color_names.
parent_type_of_cancer	Id of existing parent, e.g. "nfib" for Neurofibroma.

nf-osi/nfportalutils documentation built on Feb. 26, 2024, 1:05 p.m.