GetSpp.fn: Get Species Information

In nwfsc-assess/nwfscSurvey: Northwest Fisheries Science Center Survey

Get Species Information

Description

Get the scientific name, common name, and strata group for a vector of species.

Usage

GetSpp.fn(species, unident = FALSE)

Arguments

species	A vector of species names. The words can be separated using spaces or underscores. Full names are not required but they will increase the consistency of the results should partial matches return multiple matches.
unident	A logical entry with the default value of FALSE, to match historical output that did not include unidentified groups.

Value

A data frame with the scientific name in the latin column and in the scientific_name column that has spaces replaced with underscores; common name in the common column and in the common_name column that has spaces replaced with underscores; species values used as input in the input column; and strata used to assess its status in the strata column.

Author(s)

Kelli Faye Johnson

See Also

See PullSpp.fn for information on common and scientific names; and GetStrata.fn for the different stratifications.

Examples

GetSpp.fn(c("sablefish", "petrale"))
# Expect a warning because vermilion doesn't have an strata assigned to it
testthat::expect_warning(
  GetSpp.fn(c("vermilion"))
)
# Dusky returns multiple entries
testthat::expect_warning(
  GetSpp.fn(c("dusky"))
)

nwfsc-assess/nwfscSurvey documentation built on April 29, 2024, 9:51 p.m.