PlotBio.fn: Plots the biomass with confidence intervals

In nwfsc-assess/nwfscSurvey: Northwest Fisheries Science Center Survey

Plots the biomass with confidence intervals

Description

Plots the biomass with confidence intervals

Usage

PlotBio.fn(
  dir = NULL,
  dat,
  CI = 0.95,
  scalar = 1e+06,
  gap = 0.03,
  ylab = "Biomass ('000 mt)",
  xlab = "Year",
  main = NULL,
  ylim = NULL,
  add = FALSE,
  col = "black",
  dopng = lifecycle::deprecated(),
  ...
)

Arguments

dir	directory to save the file
dat	object created by the GetTotalBiomass.fn
CI	confidence interval
scalar	simply the divisor for the biomass
gap	a value that introduces a slight gap between the point estimate and the start of the line for the CI. A gap too large will invert the CI, making it look huge. You should know when this happens
ylab	y-axis text label
xlab	x-axis text label
main	plot label
ylim	y-limits
add	add additional line to plot
col	color
dopng	Deprecated with nwfscSurvey 2.1 because providing a non-NULL value to dir can serve the same purpose as dopng = TRUE without the potential for errors when dopng = TRUE and dir = NULL. Thus, users no longer have to specify dopng to save the plot as a png.
...	Additional arguments for the plots

Author(s)

Allan Hicks and John Wallace

nwfsc-assess/nwfscSurvey documentation built on March 19, 2024, 11:57 p.m.