get_top50_mapping: Get top 50 mapping positions
In ohlerlab/RiboseQC: RiboseQC, a Comprehensive Ribo-Seq Analysis Tool
get_top50_mapping R Documentation
Get top 50 mapping positions
Description
This function retrieves data on the top 50 positions (nucleotide resolution) are listed
where most reads (their 5' end) map to, revealing possibly contaminating sequences.
This data is used in the Ribo-seQC report in section 5 (displayed as table).
Usage
get_top50_mapping(rdata_list)
Arguments
rdata_list
List of RiboseQC analysis RData objects generated by generate_rdata_list.
Value
This function returns data to be displayed as table in the html report.
Author(s)
Dominique Sydow, dominique.sydow@posteo.de
See Also
create_html_report
ohlerlab/RiboseQC documentation built on Aug. 15, 2023, 7:30 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| get_top50_mapping | R Documentation |
Get top 50 mapping positions
Description
This function retrieves data on the top 50 positions (nucleotide resolution) are listed
where most reads (their 5' end) map to, revealing possibly contaminating sequences.
This data is used in the Ribo-seQC report in section 5 (displayed as table).
Usage
get_top50_mapping(rdata_list)
Arguments
rdata_list |
List of RiboseQC analysis RData objects generated by |
Value
This function returns data to be displayed as table in the html report.
Author(s)
Dominique Sydow, dominique.sydow@posteo.de
See Also
create_html_report
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.