plot_metagene_bar_rmd: Plot 5'/P-site profile per read length as barplot in R...
In ohlerlab/RiboseQC: RiboseQC, a Comprehensive Ribo-Seq Analysis Tool
plot_metagene_bar_rmd R Documentation
Plot 5'/P-site profile per read length as barplot in R Markdown
Description
This function plots a 5' or P-site profile as barplot
(for a specific originating compartment, resolution type, and read length).
This plot is used in the Ribo-seQC report in section 4.1/4.3.
Usage
plot_metagene_bar_rmd(metagene_data, sample = "", output_rds_path = "")
Arguments
metagene_data
...
sample
String; sample name (selected from the input names given in the input_sample_names parameter of create_html_report).
output_rds_path
String; full path to output folder for RDS object files created by this function. Defaults to NOT save RDS; to save RDS, provide path to destination folder.
Value
...
Author(s)
Dominique Sydow, dominique.sydow@posteo.de
See Also
create_html_report
ohlerlab/RiboseQC documentation built on Aug. 15, 2023, 7:30 a.m.
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| plot_metagene_bar_rmd | R Documentation |
Plot 5'/P-site profile per read length as barplot in R Markdown
Description
This function plots a 5' or P-site profile as barplot
(for a specific originating compartment, resolution type, and read length).
This plot is used in the Ribo-seQC report in section 4.1/4.3.
Usage
plot_metagene_bar_rmd(metagene_data, sample = "", output_rds_path = "")
Arguments
metagene_data |
... |
sample |
String; sample name (selected from the input names given in the |
output_rds_path |
String; full path to output folder for RDS object files created by this function. Defaults to NOT save RDS; to save RDS, provide path to destination folder. |
Value
...
Author(s)
Dominique Sydow, dominique.sydow@posteo.de
See Also
create_html_report
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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