View source: R/beIDsToAllScopes.R
beIDsToAllScopes | R Documentation |
Find all BEID and ProbeID corresponding to a BE
beIDsToAllScopes(
beids,
be,
source,
organism,
entities = NULL,
canonical_symbols = TRUE
)
beids |
a character vector of gene identifiers |
be |
one BE. Guessed if not provided |
source |
the source of gene identifiers. Guessed if not provided |
organism |
the gene organism. Guessed if not provided |
entities |
a numeric vector of gene entity. If NULL (default), beids, source and organism arguments are used to identify BEs. Be carefull when using entities as these identifiers are not stable. |
canonical_symbols |
return only canonical symbols (default: TRUE). |
A data.frame with the following fields:
value: the identifier
be: the type of BE
source: the source of the identifier
organism: the BE organism
symbol: canonical symbol of the identifier
BE_entity: the BE entity input
BEID (optional): the BE ID input
BE_source (optional): the BE source input
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