View source: R/firstCommonUpstreamBe.R
firstCommonUpstreamBe | R Documentation |
Returns the first common Biological Entity (BE) upstream a set of BE.
firstCommonUpstreamBe(beList = listBe(), uniqueOrg = TRUE)
beList |
a character vector containing BE |
uniqueOrg |
a logical value indicating if as single organism is under focus. If false "Gene" is returned. |
This function is used to identified the level at which different BE should be compared. Peptides and transcripts should be compared at the level of transcripts whereas transcripts and objects should be compared at the level of genes. BE from different organism should be compared at the level of genes using homologs.
listBe
## Not run:
firstCommonUpstreamBe(c("Object", "Transcript"))
firstCommonUpstreamBe(c("Peptide", "Transcript"))
firstCommonUpstreamBe(c("Peptide", "Transcript"), uniqueOrg=FALSE)
## End(Not run)
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