cn_findSpecGenes: find genes that are preferentially expressed in specified...

cn_findSpecGenesR Documentation

find genes that are preferentially expressed in specified samples

Description

find genes that are preferentially expressed in specified samples

Usage

cn_findSpecGenes(expDat, sampTab, holm = 1e-50, cval = 0.5,
  dLevel = "description1", prune = FALSE)

Arguments

expDat

expression matrix

sampTab

sample table

holm

sig threshold

cval

R thresh

dLevel

annotation level to group on

prune

boolean limit to genes exclusively detected as CT in one CT

Value

a list of something


pcahan1/CellNet documentation built on July 5, 2022, 5:06 a.m.