cn_nis_all: Network Influence Score for all GRNs

cn_nis_allR Documentation

Network Influence Score for all GRNs

Description

Runs cn_nis on all GRNs

Usage

cn_nis_all(cnRes, cnProc, ctt, relaWeight = 1)

Arguments

cnRes

object result of running cn_apply

cnProc

object result of running cn_make_processor

ctt

string indicating the CT to compare against

relaWeight

whether to weight by overall expression such that TFs with higher expression in ctt are more important (1=do the weighting)

Value

list of numeric matrix of TF scores


pcahan1/CellNet documentation built on July 5, 2022, 5:06 a.m.