cn_nis: network influence score

cn_nisR Documentation

network influence score

Description

Computes network influence score (NIS). See paper for details.

Usage

cn_nis(cnRes, cnProc, subnet, ctt, relaWeight = 1)

Arguments

cnRes

object result of running cn_apply

cnProc

object result of running cn_make_processor

subnet

name of subnet to evaluage

ctt

string indicating the CT to compare against

Value

numeric matrix where rows are TFs in CT GRN and columns are query samples


pcahan1/CellNet documentation built on July 5, 2022, 5:06 a.m.