cn_score: GRN status

cn_scoreR Documentation

GRN status

Description

Calculates the GRN status in query samples as compared to training data

Usage

cn_score(expDat, subList, tVals, classList = NULL, minVals = NULL,
  classWeight = FALSE, exprWeight = TRUE, xmax = 1000)

Arguments

expDat

query expression matrix

subList

of ct => genes

tVals

list of ctt->list(means->genes, sds->genes)

classList

class list

minVals

min vals

classWeight

classweght

exprWeight

expression weight

Value

GRN scores


pcahan1/CellNet documentation built on July 5, 2022, 5:06 a.m.