load10x: Loads 10x data mtx

In pcahan1/singleCellNet: cell identity from single cell RNA-Seq data

Description

Loads 10x data mtx

Usage

load10x(path, prefix, mtx_fname = "matrix.mtx",
  gene_fname = "genes.tsv", bc_fname = "barcodes.tsv",
  bcFiltered = TRUE, removeRedundant = TRUE)

Arguments

path	path
prefix	label to facilitate merging data sets when UMIs might collide
mtx_fname	mtx_fname
gene_fname	gene_fname
bc_fname	bc_fname
bcFiltered	bcFiltered
removeRedundant	removeRedundant

Value

list of list(sampTab=sampTab, expDat=expDat)

pcahan1/singleCellNet documentation built on April 9, 2021, 8:49 a.m.